lncRNA name in article | Virus & Strain Name | Dosage & Time point | Cell line | Experiment Type | Fold change | Expression | P-value | Differential expression quantification method | Statistical method | Year | PubMed ID |
---|---|---|---|---|---|---|---|---|---|---|---|
SNHG15 | Zika virus (MR766 strain of ZIKV (African lineage)) | MOI < 0.1 ;
56 hr |
Human neural progenitor cells (hPCs) | RNA-Seq | 2.016929243 | Upregulation | p ≤ 0.05 | Cuffdiff | two Sample t-test | 2017 | 29116029 |
SNHG15 | Middle East Respiratory Syndrome Coronavirus (EMC_2012 strain of (MERS-CoV)) | MOI = 3 ;
24 hr |
MRC-5 Human fetal lung fibroblast cells | RNA-Seq | 1.641927015 | Upregulation | 3.02E-12 | student's t test | 2020 | 32416070 | |
SNHG15 | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 0.2 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells (ACE2+) | RNA-Seq | 1.532694325 | Upregulation | 0.001195136 | student's t test | 2020 | 32416070 | |
SNHG15 | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 2 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells (ACE2+) | RNA-Seq | 2.933509563 | Upregulation | 4.50E-38 | student's t test | 2020 | 32416070 | |
ENSG00000232956 | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 2 ;
24 hr |
Primary Human Bronchial epithelial (NHBE) cells | RNA-Seq | 0.389425614 | Downregulation | 0.004450758 | two-tailed t-test | 2020 | 32646047 |
* MOI :Multiplicity of infection , TCID :Tissue Culture Infectious Dose