Virus & Strain : Influenza A virus (A/Puerto Rico/8/34 (H1N1) strain of IAV)
NCBI/Ensembl Id Dosage & Time point Experiment Type Cell line lncRNA name as in article Expression Fold change P-value Differential expression quantification method Statistical method Year PubMed ID
PSMB8-AS1 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells PSMB8-AS1 Upregulation 10 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
PSMB8-AS1 MOI = 0.02;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells PSMB8-AS1 Upregulation 8 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
PSMB8-AS1 MOI = 0.2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells PSMB8-AS1 Upregulation 15 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
PSMB8-AS1 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells PSMB8-AS1 Upregulation 13 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
PSORS1C3 MOI = 2;
24 h		 RNA-Seq A-549 Human adenocarcinomic alveolar basal epithelial cells PSORS1C3 Upregulation 8 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000270829 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC015849.2 Upregulation 60 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000257452 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells RP1-71H24.1 Upregulation 20 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000267898 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells CTD-2639E6.9 Upregulation 18 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000234431 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC007283.5 Upregulation 12 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000234431 MOI = 2;
24 h		 RNA-Seq A-549 Human adenocarcinomic alveolar basal epithelial cells RP11-670E13.5 Upregulation 5 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000270829 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC015849.2 Upregulation 30 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000257452 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells RP1-71H24.1 Upregulation 25 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000234431 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC007283.5 Upregulation 15 p < 0.001   Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000270240 MOI = 0.2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC015849.2 Upregulation 5 p < 0.001  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000270240 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC015849.2 Upregulation 10 p < 0.001   Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000257452 MOI = 0.02;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells RP1-71H24.1 Upregulation 5 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000257452 MOI = 0.2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells RP1-71H24.1 Upregulation 13 p < 0.001   Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000257452 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells RP1-71H24.1 Upregulation 14 p < 0.001   Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000267898 MOI = 0.2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells CTD-2639E6.9 Upregulation 10 p < 0.01  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000267898 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells CTD-2639E6.9 Upregulation 10 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000234431 MOI = 0.2;
24 h 		qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC007283.5 Upregulation 1.8 p < 0.01  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
ENSG00000234431 MOI = 2;
24 h		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells AC007283.5 Upregulation 3 p < 0.05  Cufflinks/Cuffdiff  student’s t-test 2019 30669933
TSPOAP1-AS1 MOI = 3 ;
24 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 6 P < 0.01 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
6 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 2 P < 0.05 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
12 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 2.5 P < 0.05 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
24 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 6 P < 0.01 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
48 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 4.8 P < 0.01 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 0.3 ;
24 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 2 P < 0.05 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
24 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells TSPOAP1-AS1 Upregulation 5.8 P < 0.01 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
24 hr		 qPCR Caco-2 Human colorectal adenocarcinoma cell line TSPOAP1-AS1 Upregulation >1.5 P < 0.05 student t test with two‐tailed analysis 2019 30968963
TSPOAP1-AS1 MOI = 3 ;
24 hr		 qPCR SH-SY5Y Human neuroblastoma cell line TSPOAP1-AS1 Upregulation >1.5 P < 0.05 student t test with two‐tailed analysis 2019 30968963
ASB16-AS1 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells ASB16-AS1 Downregulation 0.584241873 0.371062124 student's t test  2020 32416070
C6orf223 MOI < 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells C6orf223 Upregulation 1.780750006 1 student's t test  2020 32416070
DGCR11 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells DGCR11 Downregulation 0.632479012 1 student's t test  2020 32416070
FAM201A MOI = 5 ;
9 hr		 RNA-Seq A-549 Human adenocarcinomic alveolar basal epithelial cells FAM201A Downregulation 0.472370246 0.042484469 student's t test  2020 32416070
FLJ20021 MOI < 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells FLJ20021 Downregulation 0.640225442 0.707789887 student's t test  2020 32416070
IDI2-AS1 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells IDI2-AS1 Downregulation 0.487552911 1 student's t test  2020 32416070
KIAA1656 MOI < 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells KIAA1656 Downregulation 0.536318549 0.900013912 student's t test  2020 32416070
LINC00641 MOI = 5 ;
9 hr		 RNA-Seq A-549 Human adenocarcinomic alveolar basal epithelial cells LINC00641 Upregulation 3.863022284 9.20E-08 student's t test  2020 32416070
LINC00672 MOI = 5 ;
9 hr		 RNA-Seq A-549 Human adenocarcinomic alveolar basal epithelial cells LINC00672 Upregulation 2.422270529 0.047350315 student's t test  2020 32416070
LOC729737 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells LOC729737 Downregulation 0.542808308 1 student's t test  2020 32416070
MGC12916 MOI < 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells MGC12916 Upregulation 1.920879399 1 student's t test  2020 32416070
NEAT1 MOI = 5 ;
9 hr		 qPCR A-549 Human adenocarcinomic alveolar basal epithelial cells NEAT1 Downregulation 0.408364681 5.43E-09 student's t test  2020 32416070
PITPNA-AS1 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells PITPNA-AS1 Downregulation 0.638230027 0.280013332 student's t test  2020 32416070
SNHG12 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells SNHG12 Downregulation 0.609137766 0.272802809 student's t test  2020 32416070
SNHG7 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells SNHG7 Downregulation 0.640955851 1 student's t test  2020 32416070
TP53TG1 MOI = 2 ;
24 hr		 RNA-Seq Primary Human Bronchial epithelial (NHBE) cells TP53TG1 Downregulation 0.657079196 0.602379812 student's t test  2020 32416070

* MOI :Multiplicity of infection , TCID :Tissue Culture Infectious Dose

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