Virus & Strain : Zika virus (MR766 strain of ZIKV (African lineage))
NCBI/Ensembl Id Dosage & Time point Experiment Type Cell line lncRNA name as in article Expression Fold change P-value Differential expression quantification method Statistical method Year PubMed ID
ASB16-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) ASB16-AS1 Downregulation 0.366325767 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
B3GAT1-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-627G23.1 Downregulation 0.343066653 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
CERS6-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CERS6-AS1 Downregulation 0.000240002 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
DANCR MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) DANCR Downregulation 0.491125863 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
DGCR5 MOI < 0.1 ;
56 hr		 Microarray Human neural progenitor cells (hPCs) DGCR5 Downregulation 0.35507148 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
DGCR5 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) DGCR9 Downregulation 0.35507148 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
DIO3OS MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) DIO3OS Downregulation 0.399471682 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
DLX6-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) DLX6-AS1 Downregulation 0.236960143 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
EMSY-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-111M22.3 Downregulation 0.400186774 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
EOLA2-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC00894 Downregulation 0.17044182 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
GABPB1-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) GABPB1-AS1 Downregulation 0.373869267 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
H19 MOI < 0.1 ;
56 hr		 Microarray Human neural progenitor cells (hPCs) H19 Downregulation 0.447519887 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
HCG17 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) HCG17 Downregulation 0.384792332 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
HCG18 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) HCG18 Downregulation 0.384792332 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ILF3-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) ILF3-AS1 Downregulation 0.352171026 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
INSIG1-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) AC144652.1 Upregulation 2.521449514 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ITGA9-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) ITGA9-AS1 Downregulation 0.25366225 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
KC6 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) KC6 Downregulation 0.354989903 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LAMTOR5-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LAMTOR5-AS1 Upregulation 2.24355952 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LHX5-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LHX5-AS1 Downregulation 0.405317583 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC00342 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC00342 Downregulation 0.44991377 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC00404 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC00404 Downregulation 0.202197739 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC00472 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC00472 Downregulation 0.476001174 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC00963 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC00963 Downregulation 0.314416523 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC00963 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-492E3.51 Downregulation 0.314416523 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC01239 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC01239 Downregulation 0.34720897 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC01521 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC01521 Downregulation 0.363755848 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC01560 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC01560 Downregulation 0.30083338 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC01963 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) PKI55 Downregulation 0.4780643 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC02246 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) AF127936.7 Upregulation 3.699775737 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LINC02487 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-351J23.1 Downregulation 0.337902119 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LOC107985535 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) WI2-85898F10.1 Downregulation 0.487363327 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LOC107985535 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) WI2-85898F10.2 Downregulation 0.310530811 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
LOC730183 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-146F11.1 Downregulation 0.115396007 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
MAFG-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) MAFG-AS1 Downregulation 0.475593397 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
MELTF-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) MFI2-AS1 Downregulation 0.221249222 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
MIR4453HG MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) DKFZP434I0714 Downregulation 0.387555114 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
PCCA-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-12G12.7 Downregulation 0.43437167 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
PPP1R21-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-191L17.1 Downregulation 0.5 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
PSMG3-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) PSMG3-AS1 Downregulation 0.365838647 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
PURPL MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) LINC01021 Downregulation 0.303018713 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
PVT1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) PVT1 Upregulation 2.029742544 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
RAD51-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RAD51-AS1 Downregulation 0.294925704 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
SLC9A3-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CTD-2228K2.7 Downregulation 0.28660674 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
SNAI3-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) SNAI3-AS1 Downregulation 0.442100884 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
SNHG15 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) SNHG15 Upregulation 2.016929243 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
SNHG30 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-1094M14.11 Downregulation 0.401278517 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
THRIL MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) THRIL Downregulation 0.371586465 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
TMEM147-AS1 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) TMEM147-AS1 Downregulation 0.299908057 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
WASL-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-390E23.6 Downregulation 0.331323414 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ZMPSTE24-DT MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP1-39G22.7 Downregulation 0.423289762 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000225792 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) AC004540.4 Downregulation 0.401443949 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000233073 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) AC005009.2 Upregulation 3.223741765 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000230606 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) AC159540.1 Downregulation 0.485626221 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000254556 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) AF131215.2 Downregulation 0.378933745 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000280145. MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CH507-154B10.1 Downregulation 0.14997058 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000280018 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CH507-154B10.2 Downregulation 0.175087999 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000280164 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CH507-254M2.3 Downregulation 0.463263686 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000259891 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CTA-204B4.2 Downregulation 0.441412487 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000239462 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CTD-2021J15.1 Downregulation 0.19083 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000267886. MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) CTD-2291D10.4 Downregulation 0.47132948 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000262877 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-1055B8.4 Downregulation 0.366474642 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000232295 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-154D6.1 Downregulation 0.476001174 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000284428 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-15H20.6 Downregulation 0.3832937 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000269107 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-15H20.7 Downregulation 0.3832937 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000273270 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-212P7.2 Downregulation 0.492471245 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000260618 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-23N2.4 Upregulation 2.696773588 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000232063 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-307E17.8 Downregulation 0.476225982 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000250049 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-348J24.2 Upregulation 2.203730535 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000268220 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-379K17.12 Upregulation 2.896473379 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000272667 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-395A13.2 Downregulation 0.429102758 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000238058 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-432J22.2 Downregulation 0.325829836 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000269926 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-442H21.2 Upregulation 4.218271149 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000260317 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-48B3.4 Upregulation 3.354951026 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000263585 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-498C9.13 Upregulation 2.286436563 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000259275 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-522B15.3 Downregulation 0.326511338 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000272512 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-54O7.17 Downregulation 0.369602035 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000274828 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-567M16.6 Downregulation 0.416350733 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000197099 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-573D15.8 Upregulation 2.223459317 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000258377 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-649E7.5 Upregulation 2.02364434 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000223356 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-66D17.5 Upregulation 2.21692 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000272769 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-725P16.2 Downregulation 0.349607343 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000255468 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-867G23.8 Downregulation 0.167527007 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000267026 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP11-92C4.3 Downregulation 0.187304297 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000269966 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP3-331H24.5 Downregulation 0.476001174 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029
ENSG00000268858 MOI < 0.1 ;
56 hr		 RNA-Seq Human neural progenitor cells (hPCs) RP4-591C20.9 Downregulation 0.211540625 p ≤ 0.05 Cuffdiff two Sample t-test 2017 29116029

* MOI :Multiplicity of infection , TCID :Tissue Culture Infectious Dose

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