lncRNA name in article | Virus & Strain Name | Dosage & Time point | Cell line | Experiment Type | Fold change | Expression | P-value | Differential expression quantification method | Statistical method | Year | PubMed ID |
---|---|---|---|---|---|---|---|---|---|---|---|
ENST00000411630 | Influenza A virus (A_WSN_33 (H1N1) strain of IAV) | MOI = 1 ;
8 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | NCode™– Microarray | 2 | Upregulation | p < 0.01 | Rosetta Resolver Biosoftware, Build 7.2.2 SP1.31 (Rosetta Biosoftware) | one-sample t test | 2014 | 24440876 |
ENST00000411630 | Influenza A virus (A_WSN_33 (H1N1) strain of IAV) | MOI = 1 ;
8 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | Sureprint™ G3 Microarray | 2 | Upregulation | p < 0.01 | Rosetta Resolver Biosoftware, Build 7.2.2 SP1.31 (Rosetta Biosoftware) | one-sample t test | 2014 | 24440876 |
ENST00000411630 | Influenza A virus (A_WSN_33 (H1N1) strain of IAV) | MOI = 1 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | NCode™– Microarray | 8 | Upregulation | p < 0.01 | Rosetta Resolver Biosoftware, Build 7.2.2 SP1.31 (Rosetta Biosoftware) | one-sample t test | 2014 | 24440876 |
ENST00000411630 | Influenza A virus (A_WSN_33 (H1N1) strain of IAV) | MOI = 1 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | Sureprint™ G3 Microarray | 8 | Upregulation | p < 0.01 | Rosetta Resolver Biosoftware, Build 7.2.2 SP1.31 (Rosetta Biosoftware) | one-sample t test | 2014 | 24440876 |
DANCR | Zika virus (MR766 strain of ZIKV (African lineage)) | MOI < 0.1 ;
56 hr |
Human neural progenitor cells (hPCs) | RNA-Seq | 0.491125863 | Downregulation | p ≤ 0.05 | Cuffdiff | two Sample t-test | 2017 | 29116029 |
DANCR | Human parainfluenza virus 3 (JS strain of HPIV3) | MOI = 2 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | RNA-Seq | 0.408070558 | Downregulation | 0.025449981 | student's t test | 2020 | 32416070 | |
DANCR | Respiratory syncytial virus (A2 strain of RSV) | MOI = 2 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | RNA-Seq | 0.304598061 | Downregulation | 0.000887124 | student's t test | 2020 | 32416070 | |
DANCR | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 2 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells | RNA-Seq | 0.638089191 | Downregulation | 2.25E-05 | student's t test | 2020 | 32416070 | |
DANCR | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 2 ;
24 hr |
A-549 Human adenocarcinomic alveolar basal epithelial cells (ACE2+) | RNA-Seq | 2.09823947 | Upregulation | 3.34E-18 | student's t test | 2020 | 32416070 | |
DANCR | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 2 ;
24 hr |
Calu-3 Human adenocarcinomic lung epithelialcells | RNA-Seq | 0.38134006 | Downregulation | 1.31E-13 | student's t test | 2020 | 32416070 | |
ENSG00000226950 | Severe acute respiratory syndrome coronavirus 2 (USA-WA1_2020 strain of SARS-CoV-2) | MOI = 2 ;
24 hr |
Primary Human Bronchial epithelial (NHBE) cells | RNA-Seq | 0.252418301 | Downregulation | 3.11E-07 | two-tailed t-test | 2020 | 32646047 |
* MOI :Multiplicity of infection , TCID :Tissue Culture Infectious Dose