Virus & Strain : Herpes simplex virus type 1 (KOS Strain of HSV-1)
NCBI/Ensembl Id Dosage & Time point Experiment Type Cell line lncRNA name as in article Expression Fold change P-value Differential expression quantification method Statistical method Year PubMed ID
4931403G20Rik MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_038172.1 Upregulation 2.12 p < 0.05 student’s t-test 2020 33173149
6230400D17Rik MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_029446.1 Upregulation 2.22 p < 0.05 student’s t-test 2020 33173149
AI839979 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_102275.1 Upregulation 2.19 p < 0.05 student’s t-test 2020 33173149
Crnde MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_110452.1 Upregulation 2.07 p < 0.05 student’s t-test 2020 33173149
E030011O05Rik MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_015511.2 Upregulation 2.44 p < 0.05 student’s t-test 2020 33173149
E230013L22Rik MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_126558.1 Upregulation 5.31 p < 0.05 student’s t-test 2020 33173149
G530011O06Rik MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_137283.1 Upregulation 2.69 p < 0.05 student’s t-test 2020 33173149
Gm13363 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_002688.1 Upregulation 2.47 p < 0.05 student’s t-test 2020 33173149
Gm16596 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_045751.1 Upregulation 2.63 p < 0.05 student’s t-test 2020 33173149
Gm19589 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_037971.1 Upregulation 7.34 p < 0.05 student’s t-test 2020 33173149
Gm5176 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_033603.1 Upregulation 2.37 p < 0.05 student’s t-test 2020 33173149
Kcnq1ot1 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_001461.5 Upregulation 2.29 p < 0.05 student’s t-test 2020 33173149
Map2k3os MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_027800.1 Upregulation 2.69 p < 0.05 student’s t-test 2020 33173149
Neat1 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_131212.1 Upregulation 3.19 p < 0.05 student’s t-test 2020 33173149
Phtf1os MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_030676.1 Upregulation 2.78 p < 0.05 student’s t-test 2020 33173149
Pvt1 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_132746.1 Upregulation 2.66 p < 0.05 student’s t-test 2020 33173149
Snhg16 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_027819.1 Upregulation 2.07 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 50.9 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
2 hr		 qPCR 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 4.8 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
6 hr		 qPCR 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 5 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
8 hr		 qPCR 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 9 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
10 hr		 qPCR 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 16 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
15 hr		 qPCR 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 70 p < 0.05 student’s t-test 2020 33173149
U90926 MOI = 5 ;
24 hr		 qPCR 661W Murine retinal photoreceptor cell line NR_033483.1 Upregulation 100 p < 0.05 student’s t-test 2020 33173149
Wincr1 MOI = 5 ;
24 hr		 RNA-Seq 661W Murine retinal photoreceptor cell line NR_033533.1 Upregulation 4.26 p < 0.05 student’s t-test 2020 33173149

* MOI :Multiplicity of infection , TCID :Tissue Culture Infectious Dose

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